Insertion junction: CLIP2.040945_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040945
Chromosome:chromosome 1
Location:6528189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046237 GEX33 (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGGGCTAGCAGGGGAGCGGCAGTAGCAGGGGTGTAGCAGGGGTGTGG
Internal bar code:TCACGGATGCTGTTGTATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGGTTCACAGCTGTGT
Suggested primer 2:GAGGGGTGTGAAGGTCATGG