Insertion junction: CLIP2.040954_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040954
Chromosome:chromosome 1
Location:5055561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035150 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTGCCACCAGGCATGCCCGGGAACCCCGGCATCCCAGCCATCTCCTG
Internal bar code:CAGGGCATACTTGCTAGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3396
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGAGACCTTGGGCAAAT
Suggested primer 2:GCAAAACCTTTGCAACACGC