Insertion junction: CLIP2.040955_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040955
Chromosome:chromosome 1
Location:2484149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014500 (1 of 1) PF06293//PF07714 - Lipopolysaccharide kinase (Kdo/WaaP) family (Kdo) // Protein tyrosine kinase (Pkinase_Tyr); Protein tyrosine kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTTAGCAACGGCGCGGAGCCTTACCCGAGCCGCTCCGACGCCGAGG
Internal bar code:GTATCTTATTGAACAATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2585
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTCCAGAGTCTATGAC
Suggested primer 2:CAAGCTGATGATGTGCGAGC