Insertion junction: CLIP2.040973_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040973
Chromosome:chromosome 7
Location:6397261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATCCACGCCGGCTGCGGGACCAGCACGGCAGTCCTCATTGGCCGCGG
Internal bar code:GTGTCAGTGCCTAGCGACAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1513
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGCCTTATGGTACCGGT
Suggested primer 2:TTGCGTTCGAGGGATCAACA