Insertion junction: CLIP2.040980_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040980
Chromosome:chromosome 4
Location:403286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217914 WDR65,FAP57,BOP2 (1 of 1) IPR001680//IPR011047//IPR015943//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain; Flagellar Associated Protein 57 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGGCACCACCACATGCATACCGGCACCACCACATGCATACCGGCATC
Internal bar code:TTTCAAGAACTATATTCTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGTTGGAGTACGCGGTG
Suggested primer 2:TTGTCCGTGAGCTCCTTGAC