Insertion junction: CLIP2.040980_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040980
Chromosome:chromosome 4
Location:403297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217914 WDR65,FAP57,BOP2 (1 of 1) IPR001680//IPR011047//IPR015943//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain; Flagellar Associated Protein 57 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGGCGGAGCTGGACCCACACGGGTCCGAGGGTGTGCCCGGCATACG
Internal bar code:ATTGCAATATAGGTTGCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCGTGAGCTCCTTGAC
Suggested primer 2:AGAAGTTGGAGTACGCGGTG