Insertion junction: CLIP2.040981_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040981
Chromosome:chromosome 6
Location:4689901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278850 MND1 GAJ-like protein; (1 of 1) PF03962 - Mnd1 family (Mnd1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCATGACGGAGGCTTCAGATGGGAAGGCCCAATAGTAGTTGGAGATTC
Internal bar code:TATGTCAAGGCAGTCGTATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGCAGTCCCAGTATGC
Suggested primer 2:CCGCAAGTCAGAGTTCCCAT