Insertion junction: CLIP2.040984_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040984
Chromosome:chromosome 7
Location:3573594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCCACGCCGCCCGCCCGCAGCGCCGCCATCGTCGCGGGTGAGGGCC
Internal bar code:GCATAAAGAAGGGCGATGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCCTACGATGAACCCA
Suggested primer 2:GTAACTCCGGCCACCATGAA