Insertion junction: CLIP2.040986_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040986
Chromosome:chromosome 13
Location:3724951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801564 (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCCATGCCCACCCACGAAACTTTCACAGGTGCGACTGCAGGCCTTGC
Internal bar code:TGTGCACCTGAGTGCAGCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1075
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACACTTCAAACACGGCG
Suggested primer 2:CCTCCCGCACGTACTTTCTT