Insertion junction: CLIP2.040993_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040993
Chromosome:chromosome 2
Location:3999046
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCAGCAGGGCTACAGCCCACATCACCAGCAACCCGAAGGCAGCCCCG
Internal bar code:CGATGTCAGTCAAACAGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAATGGCCCATGGGAAG
Suggested primer 2:CGGCGAAGAGATGCATTTGG