Insertion junction: CLIP2.040995_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040995
Chromosome:chromosome 16
Location:5171921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685100 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAGTGTGAGTCGCCACGCCGTTGCGCTAAGCGTGCCGCGGACTGCT
Internal bar code:CGGGGGAGGTTGATGGATTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGCGAACCGGATGTCA
Suggested primer 2:CGACCGGTTGTGTAGTCCAA