Insertion junction: CLIP2.040998_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040998
Chromosome:chromosome 16
Location:6015992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGGTCCTGGGTCTGCTCTTGGGATTTGCACATAATATTGCTGTGGC
Internal bar code:GGCACTTGTAGTCACAGCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGGTACTGAAGCTGGTG
Suggested primer 2:ATGGCTTCACGTTGGTTTGC