Insertion junction: CLIP2.041000_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041000
Chromosome:chromosome 16
Location:1680393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654600 PHC56 (1 of 71) PF12499 - Pherophorin (DUF3707); Pherophorin-chlamydomonas homolog 56 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCAGCCCTGAGCCACCGTCCCCAGCGCCTCCCAGCCCTGAGCCACCG
Internal bar code:GATGGGGGCCGTGTGGGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGGTATAGTAGGGAGGA
Suggested primer 2:CCTACCCACCATCCTACCCA