Insertion junction: CLIP2.041003_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041003
Chromosome:chromosome 17
Location:3053285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATTTAAGTTGGTGGCCAGACTCGGCGGAAAAAAGCGATATCAGCCA
Internal bar code:GAGAAGAACACGAGCAGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTTCACGGACTTCCCAT
Suggested primer 2:CGTAGCTACCAGACACCCAG