Insertion junction: CLIP2.041003_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041003
Chromosome:chromosome 17
Location:3053285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACACAACCTTGCGCTTCAGGAACTTGAGGAGCTGTTGTTTGAGCCGT
Internal bar code:GAGAAGAACACGAGCAGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1943
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCTACCAGACACCCAG
Suggested primer 2:GTCGTTCACGGACTTCCCAT