Insertion junction: CLIP2.041006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041006
Chromosome:chromosome 16
Location:2713315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661900 HEL61 (1 of 3) PTHR24031//PTHR24031:SF232 - RNA HELICASE // ATP-DEPENDENT RNA HELICASE TDRD12-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGACAGAGAAACAGAGACCGTGCAGTCGAGAAGGGTTGCCACAGTGAC
Internal bar code:TGCTGTGTTCCCAGGTCTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTGGCAGAACATTGGC
Suggested primer 2:TAGCCGAGGAACGACTGGTA