Insertion junction: CLIP2.041010_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041010
Chromosome:chromosome 13
Location:5254501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607850 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGGTGGCCGCTGTGCTGTTGTAGGAGAGCTGTGATGGCGTCCGCAAC
Internal bar code:AGAGAAGGACTCCTATTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGCAAGTCCAAGGTAAG
Suggested primer 2:CCCCACACGCAAAAAGACAG