Insertion junction: CLIP2.041016_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041016
Chromosome:chromosome 15
Location:5666427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801854 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAATGAGCGGCCGTCCGGCGGGGGCGGAGGGGGCTCGTGCGGTTGGT
Internal bar code:AAAGGTGAGATGTCGGGTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGAACAGCAAGTAGGGG
Suggested primer 2:AGAGCGTGTGTGTATGGGTG