Insertion junction: CLIP2.041019_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041019
Chromosome:chromosome 16
Location:5036082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686000 SRS15 (1 of 1) K13096 - splicing factor 4 (SF4); putative RNA-binding protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGTGCCAAACCCTCCTGTAAACCCTAACCCCCCAAAACACACGCAC
Internal bar code:AAGGGTTGCTTAAGCGGGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACATACACACGCACG
Suggested primer 2:AACAAAGATTTGCACCCCGC