Insertion junction: CLIP2.041024_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041024
Chromosome:chromosome 7
Location:2112899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326350 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain intron
Cre07.g326400 (1 of 1) PTHR21236:SF1 - PROTEIN YIPF6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTATCTTCATGCAGCCCGGACATGACCAAGTACGTTGTGTCCACGCT
Internal bar code:GTGATCTATACTTGTTATCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCCTCCCTCCCTCTCCC
Suggested primer 2:CAAATATGTGCGGCGGGAAG