Insertion junction: CLIP2.041047_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041047
Chromosome:chromosome 13
Location:3638380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588050 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATAATTTGGGGTGAAGCTAGAGTTGACATTCTAAAATGCTAGGACAC
Internal bar code:TCCTTGGTATTGATGCTGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2856
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGCGTGGACAGGCAAA
Suggested primer 2:GGCGTGTAGGCTAGGTCATC