Insertion junction: CLIP2.041051_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041051
Chromosome:chromosome 2
Location:4908416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110000 (1 of 1) PF07974//PF13920 - EGF-like domain (EGF_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGCAGATGGCGCACGTGGCCGCGCTGATGCCGGGGCCTCCCCCGCC
Internal bar code:GTGTACGGCTGGAAATGCCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:20.8333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCGGACCATTACGAGG
Suggested primer 2:CACGCTTCAACTCATACGCG