Insertion junction: CLIP2.041052_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041052
Chromosome:chromosome 12
Location:7531416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556500 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCATGACAGGACGGTACTGTGCTGTGACCTCACCCTTCCCGCCCAA
Internal bar code:CAAAATTAAAACTACCTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTACCAACACAGAGCCT
Suggested primer 2:ATCTTCTTTGCCGGCGAAGA