Insertion junction: CLIP2.041052_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041052
Chromosome:chromosome 12
Location:7531441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556500 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGCATGGCCCTTGGCTAACCAAATTTCGCTTGCACGAAGACACGCTC
Internal bar code:TTCCCCGGCAGCCAAGTATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3110
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCTTTGCCGGCGAAGA
Suggested primer 2:GCAGTACCAACACAGAGCCT