Insertion junction: CLIP2.041058_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041058
Chromosome:chromosome 2
Location:1571393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084800 SPO11A (1 of 1) K10878 - meiotic recombination protein SPO11 (SPO11); meoisis-related DNA topoisomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCTGCACCCTGCCCAGGGCGCCAGGGCCACTGTTGCTGCCAACCTG
Internal bar code:TTTGATTACCACACAAAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCACCTCAAACAGTTTG
Suggested primer 2:AAGTGAGTAGGCACACCAGC