Insertion junction: CLIP2.041064_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041064
Chromosome:chromosome 3
Location:716542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145907 (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTGACATATTCAGTGGTGAGCACGCCGTGGCGGAGCACGCCGACTT
Internal bar code:GTGAGGGTCACATACAAACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCCCATCACCCACCAG
Suggested primer 2:CTCCTCCAGGTGATCCCAGA