Insertion junction: CLIP2.041074_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041074
Chromosome:chromosome 1
Location:3755696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024500 (1 of 1) K16484 - rotatin (RTTN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTTCCGGGTGGGTCCCATTTACTGTGGCGCCATGTCTGTTTCACCC
Internal bar code:ATCGTAATAAGTTGGGAGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2315
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCAATGTCCCGTACCGC
Suggested primer 2:CCTGTCTTGTGCTGTTGTGC