Insertion junction: CLIP2.041079_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041079
Chromosome:chromosome 17
Location:2927184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802060 (1 of 3) IPR008783 - Podoplanin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGTCAGCAGCCCGCACGCGTGCATGCGCCACCCACCATCGCTCCAG
Internal bar code:GTTCTAGTGTGGACAAACTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTCTGCCAGCAGTGTG
Suggested primer 2:GTGTGGACAACGTGTTGCTC