Insertion junction: CLIP2.041081_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041081
Chromosome:chromosome 3
Location:6250026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTCATGCAGCTGAGAGGAATGGGGAGTGGCCAGGGCGACCCCGCCAC
Internal bar code:CGTACATGCCGCCCTGGCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAAAGTTACCTCCGACC
Suggested primer 2:AAGGACTGGATGCAGCACTC