Insertion junction: CLIP2.041094_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041094
Chromosome:chromosome 2
Location:1555981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084650 (1 of 2) PTHR10997:SF7 - IMPORTIN-11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCTTGACCCCACTCCTATCTAGTCACGTCTGCAACACTCCCCACC
Internal bar code:GGTTTATGAGGTTCAGGGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1170
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGACCATCCATGCAACC
Suggested primer 2:TGCAGCTTGTACGGGAGAAG