Insertion junction: CLIP2.041108_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041108
Chromosome:chromosome 3
Location:2373379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTCGGCCAACAGCCCGAAACTCAGCCGCAGTGCCGACGCCAGCTTGC
Internal bar code:TCCGTTTGCTAGGCTTGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAACATCCGCTTCACCT
Suggested primer 2:TGTTGTTCCCACTGCACCTT