Insertion junction: CLIP2.041108_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041108
Chromosome:chromosome 3
Location:2373380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGTGAGGAAGACCGGGCTGGCTGACAAAACAGGGCAGGCTGGAAAG
Internal bar code:TCCGTTTGCTAGGCTTGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5817
LEAP-Seq percent confirming:91.9355
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTTCCCACTGCACCTT
Suggested primer 2:CTCCAACATCCGCTTCACCT