Insertion junction: CLIP2.041109_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041109
Chromosome:chromosome 6
Location:5423925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285700 (1 of 1) PTHR13466:SF0 - PROTEIN F55C12.5, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGCCACCACCACGCCCACTCCGCCAGCGCCGCCAGCGCCTCTGCC
Internal bar code:GCATTCAGAGTGTCATTAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAACGCAAAGCATGGAG
Suggested primer 2:ATACACCCGCCATCATCGAC