Insertion junction: CLIP2.041110_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041110
Chromosome:chromosome 3
Location:4196740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173500 (1 of 1) PTHR23184//PTHR23184:SF9 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 14 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCCGACCCTGCACCCGTCAGACATTGCACGGGCGCCGCGCCTTAC
Internal bar code:AACGCGCGCTGAGGCAATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGAAGGTGGGGAGGAG
Suggested primer 2:CCCACATTGAAGCCGAGACT