Insertion junction: CLIP2.041110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041110
Chromosome:chromosome 3
Location:4196741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173500 (1 of 1) PTHR23184//PTHR23184:SF9 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 14 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAAGTAGGACTGCGCCGTGCCCGCTTCCATGATCCACTCGCCTTTT
Internal bar code:AACGCGCGCTGAGGCAATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACATTGAAGCCGAGACT
Suggested primer 2:GTGTTGAAGGTGGGGAGGAG