Insertion junction: CLIP2.041117_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041117
Chromosome:chromosome 12
Location:8251383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551550 (1 of 1) PF00098//PF02689//PF05970//PF13604 - Zinc knuckle (zf-CCHC) // Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // AAA domain (AAA_30) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGCTGGCGCGGGCGCTACGTGCCGGTGGTGCGCTTCGCCAACGGTGT
Internal bar code:GATGATACACAATCATAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAAAGAGCGAGGAGGAG
Suggested primer 2:TCTCGGACTCGGACTCAGAG