Insertion junction: CLIP2.041119_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041119
Chromosome:chromosome 7
Location:5231045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349152 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGACTGCCGCCGCATGCAGCTAGCTCAAGTCACCCACCTCATCGATCA
Internal bar code:TTTATGCTTGACTGTGTACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1518
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCCATATCCTCACGCAC
Suggested primer 2:GTGAACGATTCGGACGCATG