Insertion junction: CLIP2.041128_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041128
Chromosome:chromosome 15
Location:2150698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142366 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCAACACATGTCGCCCGTGCGTACCACCGCTCACACACCAGCGGTC
Internal bar code:TACACGTACTAAGCGACTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTTGCAGGTACCGTA
Suggested primer 2:ATGAAGGAGGGGGCACAATG