Insertion junction: CLIP2.041128_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041128
Chromosome:chromosome 15
Location:2150700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142366 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGCCCGTGCCTCAAAACCGCTGCCGGTCCCACTTCACCCCACCGCC
Internal bar code:TACACGTACTAAGCGACTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGAGGGGGCACAATG
Suggested primer 2:GGTGTGTTGCAGGTACCGTA