Insertion junction: CLIP2.041132_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041132
Chromosome:chromosome 17
Location:5547940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739550 CPLD12 Conserved in the Plant Lineage and Diatoms; (1 of 11) 2.7.4.3 - Adenylate kinase / Myokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAAACCCCCGCAGGTCGAGCTGCACCTGCCCGAGTTCTGGGACCCCA
Internal bar code:AGCCATAAATTGAGTAGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCACTCCGCTTTTTCAC
Suggested primer 2:GATGACGATGTGAGCGGCTA