Insertion junction: CLIP2.041138_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041138
Chromosome:chromosome 3
Location:5737989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187250 (1 of 1) PF05514 - HR-like lesion-inducing (HR_lesion) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGCTCTGACGTCACGGATGCCAAGGAGTGTGACCAACCTGTGCGGA
Internal bar code:GTTCGGTGTCTTGAGTTCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2832
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCGTCAGTATGCCATG
Suggested primer 2:TGAGCGCTATTTGGACAGCA