Insertion junction: CLIP2.041154_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041154
Chromosome:chromosome 3
Location:2479389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159200 UBC8 (1 of 2) K10589 - ubiquitin-protein ligase E3 C (UBE3C); Putative ubiquitin-protein ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGCGGGTGCCGCCGACCAGACCACGACAACAACAAATACCATCTGC
Internal bar code:TTGTTAATACATCTAAGCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGGGACTATGGGAGGC
Suggested primer 2:ATCTGGGCCACACAAGATGG