Insertion junction: CLIP2.041166_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041166
Chromosome:chromosome 7
Location:5521345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351500 (1 of 1) K15078 - structure-specific endonuclease subunit SLX1 (SLX1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATTGCAGGTGACCGGAAAGTGTGTGAAGGCTTACCGTCGTTAGGAT
Internal bar code:CGTTGTACAGCAATGATCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTTGAGCTGCTGGAGGT
Suggested primer 2:CCACTTTCTACACGGGGTCC