Insertion junction: CLIP2.041171_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041171
Chromosome:chromosome 9
Location:6286702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413950 EFH6 EF-hand Calcium binding protein; (1 of 5) PTHR23050:SF90 - CENTRIN-3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACCAGGCCGCTGCGCCGCCGGGGCGTATCCGCGTCTGTCGATGCAC
Internal bar code:CTGCATCATCTTTAGATTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4105
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCGGTTAAAAGCAGCTA
Suggested primer 2:TCCAGTGTGGATGACATGGC