Insertion junction: CLIP2.041180_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041180
Chromosome:chromosome 1
Location:5472936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038700 CLV5 Voltage-gated chloride channel; (1 of 2) K05016 - chloride channel 7 (CLCN7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGGTACAACCAGGCGACACGTGTAGGACTGCAACGACGTCATTAA
Internal bar code:TCCGTTGTCACGGTTAGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:27.1429
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACTACATAGACGAGGGC
Suggested primer 2:CAGCATGCACCTGTAGGACA