Insertion junction: CLIP2.041181_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041181
Chromosome:chromosome 9
Location:2046249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGCGGCCCAGTCGCCGGAGCCGGGCTGTGACAGCGCCAGGCCTGC
Internal bar code:TCAATGTCTATATCTAATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGATGGCGACGATGATA
Suggested primer 2:GTATGCTCGAGAGGCCCTTC