Insertion junction: CLIP2.041187_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041187
Chromosome:chromosome 3
Location:4505792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175851 (1 of 13) IPR001487 - Bromodomain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCGGCCTTGGTGACGGAGCAGAGCCCGTGGTTGGCAGCTGCCAGTG
Internal bar code:GTTGCAACGTTGTGGTGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCGCCTGGTGAAATCGC
Suggested primer 2:CTTTGCAACGGGTATGAGCG