Insertion junction: CLIP2.041202_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041202
Chromosome:chromosome 12
Location:9482753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCAAGCGCCCGGCGCACCAAACCCCCGACCCCGAACCCCTGGCCCA
Internal bar code:GATTGAGATGCCTCGTATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:95
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTGCGTCTGTCTTGGTG
Suggested primer 2:AATGAGCTGCTCAAGGGCAT