Insertion junction: CLIP2.041202_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041202
Chromosome:chromosome 12
Location:9482770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACACATGCCGGCCTCTTCCTCCACATCGCCGTGTCCCGCTTGTCTTGC
Internal bar code:GATTGAGATGCCTCGTATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGCTGCTCAAGGGCAT
Suggested primer 2:AGTCTGCGTCTGTCTTGGTG