Insertion junction: CLIP2.041204_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041204
Chromosome:chromosome 3
Location:5988944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189450 (1 of 2) PTHR22769//PTHR22769:SF33 - MUTT/NUDIX HYDROLASE // NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 17 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGGTGCGGCAGGCGCGCGGGAGCAGCGGCAACCGGCCTGGGGCTG
Internal bar code:TATGGTCAGCTTTTACTGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5302
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGAGCCGGATATTGCATC
Suggested primer 2:ATCAACACCCTGCATGTCGT